Package: pleiotest 1.0.0

pleiotest: Fast Sequential Pleiotropy Test

It performs a fast multi-trait genome-wide association analysis based on seemingly unrelated regressions. It tests for pleiotropic effects based on a series of Intersection-Union Wald tests. The package can handle large and unbalanced data and plot results.

Authors:Fernando Aguate [aut, cre], Gustavo de los Campos [aut], Alexander Grueneberg [ctb]

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pleiotest.pdf |pleiotest.html✨
pleiotest/json (API)

# Install 'pleiotest' in R:
install.packages('pleiotest', repos = c('https://feraguate.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/feraguate/pleiotest/issues

Uses libs:
  • openblas– Optimized BLAS
  • c++– GNU Standard C++ Library v3

On CRAN:

2.70 score 1 stars 2 scripts 122 downloads 9 exports 3 dependencies

Last updated 3 years agofrom:2cde7fb28a. Checks:OK: 1 NOTE: 8. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 01 2024
R-4.5-win-x86_64NOTENov 01 2024
R-4.5-linux-x86_64NOTENov 01 2024
R-4.4-win-x86_64NOTENov 01 2024
R-4.4-mac-x86_64NOTENov 01 2024
R-4.4-mac-aarch64NOTENov 01 2024
R-4.3-win-x86_64NOTENov 01 2024
R-4.3-mac-x86_64NOTENov 01 2024
R-4.3-mac-aarch64NOTENov 01 2024

Exports:identify_subsetsmanhattan_plotmt_gwaspleio_ideogrampleio_plotpleio_simulatepleio_testpleioRxrsx_xrsy

Dependencies:RColorBrewerRcppRcppArmadillo